Exploring transitions in finite-size Potts model: comparative analysis using Wang–Landau sampling and parallel tempering
F Wang, W Liu, J Ma, K Qi, Y Tang, Z Di. Journal of Statistical Mechanics: Theory and Experiment 2024 (9), 093201(2024)
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Learning noise-induced transitions by multiscaling reservoir computing
Z Lin, Z Lu, Z Di, Y Tang. Nature Communications 15 (1), 6584(2024)
Learning nonequilibrium statistical mechanics and dynamical phase transitions
Y Tang, J Liu, J Zhang, P Zhang. Nature Communications 15 (1), 1117(2024)
A deep learning model for type II polyketide natural product prediction without sequence alignment
J Huang, Q Gao, Y Tang, Y Wu, H Zhang, Z Qin. Digital Discovery 2 (5), 1484-1493(2023)
Neural-network solutions to stochastic reaction networks
Y Tang, J Weng, P Zhang. Nature Machine Intelligence 5 (4), 376-385(2023)
Quantifying information of intracellular signaling:progress with machine learning
Y Tang, A Hoffmann. Reports on Progress in Physics 85 (8), 086602(2022)
Optimizing higher-order network topology for synchronization of coupled phase oscillators
Y Tang, D Shi, L Lü. Communications Physics 5 (1), 96(2022)
Quantifying information accumulation encoded in the dynamics of biochemical signaling
Y Tang, A Adelaja, FXF Ye, E Deeds, R Wollman, A Hoffmann. Nature communications 12 (1), 1272(2021)
Free energy amplification by magnetic flux for driven quantum systems
Y Tang. Communications Physics 4 (1), 9(2021)
An incoherent feedforward loop interprets NFκB/RelA dynamics to determine TNF-induced necroptosis decisions
Marie Oliver Metzig, Y Tang, Simon Mitchell, Brooks Taylor, Robert Foreman, Roy Wollman, Alexander Hoffmann. Molecular systems biology 16 (12), e9677(2020)
Chemotaxis as a navigation strategy to boost range expansion
J Cremer, T Honda, Y Tang, J Wong-Ng, M Vergassola, T Hwa. Nature 575 (7784), 658-663(2019)
Escape rate for nonequilibrium processes dominated by strong nondetailed balance force
Y Tang, S Xu, P Ao. The Journal of Chemical Physics 148 (6)(2018)
Potential landscape of high dimensional nonlinear stochastic dynamics with large noise
Y Tang, R Yuan, G Wang, X Zhu, P Ao. Scientific reports 7 (1), 15762(2017)
Generating transverse response explicitly from harmonic oscillator
Y Yao, Y Tang, P Ao. Physical Review B 96 (13), 134414(2017)
SDE decomposition and A-type stochastic interpretation in nonequilibrium processes
R Yuan, Y Tang, P Ao. Frontiers of Physics 12, 1-9(2017)
Reversed graph embedding resolves complex single-cell trajectories
X Qiu, Q Mao, Y Tang, L Wang, R Chawla, H Pliner, C Trapnell. Nature methods 14 (10), 979-982(2017)
Decoding early myelopoiesis from dynamics of core endogenous network
H Su, G Wang, R Yuan, J Wang, Y Tang, P Ao, X Zhu. Science China Life Sciences 60, 627-646(2017)
Construction of the landscape for multi-stable systems: Potential landscape, quasi-potential, A-type integral and beyond
R Yuan, Y Tang, P Ao. The Journal of Chemical Physics 145, 147104 (2016)
Anomalous free energy changes induced by topology
Y Tang, R Yuan, P Ao. PHYSICAL REVIEW E 92, 062129 (2015)
Work relations connecting nonequilibrium steady states without detailed balance
Y Tang, R Yuan, J Chen, P Ao. PHYSICAL REVIEW E 91, 042108 (2015)
Controlling symmetry-breaking states by a hidden quantity in multiplicative noise
Y Tang, R Yuan, J Chen,and P Ao. PHYSICAL REVIEW E 90, 052121 (2014)
Summing over trajectories of stochastic dynamics with multiplicative noise
Y Tang, R Yuan, P Ao. The Journal of Chemical Physics 141, 044125 (2014)
Nonequilibrium work relation beyond the Boltzmann-Gibbs distribution
Y Tang, R Yuan, P Ao. PHYSICAL REVIEW E 89, 062112 (2014)
Dynamical behaviors determined by the Lyapunov function in competitive Lotka-Volterra systems
Y Tang, R Yuan, Y Ma. PHYSICAL REVIEW E 87, 012708 (2013)